Lines will meet even if the square or work piece isn't perfect:
Register square on face edge, mark the true face. Then register square on true face and drop line down the face edge. Register square on face edge and mark the back face. Then register square on true face and mark edge to meet the back face.
Register square on face edge, mark the true face. Then register square on true face and drop line down the face edge. Register square on face edge and mark the back face. Then register square on true face and mark edge to meet the back face.